Comparative Sequence Analysis    

The program SSCP computes predictions for the content of helix, strand, and coil for a given protein using the amino acid composition as the only input information.
The basic idea of the method consists in the application of analytic vector decomposition methods applied on the composition vector of the query protein. Both sequences and composition data are allowed as program input.

This tool was developed by Frank Eisenhaber in cooperation with Federica Imperiale (University of Genua, Dept. Mathematics, Italy).

You can send e-mail to:	federica@unige.it
	Frank.Eisenhaber@nt.imp.univie.ac.at

Table of content:

• Introduction and program documentation

• SSCP request, sequence input

• SSCP request composition input

• Typical SSCP output

Have a look at the homepage of Frank Eisenhaber

Last modified Feb. 6, 1998